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Welcome to the Pistoia Alliance Ontologies Mapping project public Wiki Space This area contains public project resources for ontology consumers and providers to support practical application and mapping. The Ontologies Mapping project has been set up to create better mapping tools and services, and to establish best practices for ontology management in the Life Sciences. For our purpose, ontologies can include hierarchical relationships, taxonomies, classifications and/or vocabularies which are becoming increasingly important for support of research and development. A general description of the Ontologies Mapping project can be found on the Pistoia Alliance web site:- Ontologies Mapping project |
Overview
- Ontologies Mapping project on the Pistoia Alliance web site
- Project status: Phase 4 is underway to extend the prototype Ontologies Mapping Service for public ontologies in the Biological and Chemical Data Analytics domain during 2019.
- Publication of our short review entitled "Ontology mapping for semantically enabled applications" in Drug Discovery Today 2019
- DOI: 10.1016/j.drudis.2019.05.020 PMID: 31158512 EUPMC: MED31158512
- Phase 3 implemented a prototype Ontologies Mapping Service for 10 mappings between 5 public ontologies in the Phenotype and Disease domains (below).
- Publication of our paper entitled “Matching disease and phenotype ontologies in the ontology alignment initiative” in J Biomedical Semantics 2016
- DOI: 10.1186/s13326-017-0162-9 PMID: 29197409 EUPMC: PMC5712086
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- Ontologies Guidelines for Best Practice
- Ontologies Mapping Tools RFI requirements and results
- Ontologies Mapping Service requirements and SLA
- Publicity folder on Google drive for presentation materials
- Community of Interest materials
- Ontologies Mapping Webinar recording, questions and panel answers from 23rd February 2017
- Publication of “Matching disease and phenotype ontologies in the ontology alignment initiative” in J Biomed Semantics
- The Ontology Alignment Evaluation Intiative (http://oaei.ontologymatching.org) includes the phenotype track organised by the Pistoia OM project
- Predicted Ontology Mappings
- 10 mappings between 5 public ontologies in the Phenotype and Disease domains from Feb 2018 of phase 3
- 10 mappings between 5 public ontologies in the Phenotype and Disease domains from Feb 2018 of phase 3
- OM/FAIR Webinar series recordings and slides
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| These wiki pages are available as read-only. Please leave any constructive feedback at the bottom of the respective wiki page or you can make specific comments or suggestions through inline comments on the wiki page. You can also contact ian.harrow@pistoiaalliance.org with any queries about this public resource. |