Ontologies Mapping Resources
Overview
- Ontologies Mapping on the Pistoia Alliance web site
- Status: Ontologies Mapping is now part of the FAIR Implementation project.
- Publication of our short review entitled "Ontology mapping for semantically enabled applications" in Drug Discovery Today 2019
- DOI: 10.1016/j.drudis.2019.05.020 PMID: 31158512 EUPMC: MED31158512
- Phase 4: mapped 54 ontologies in the laboratory analytics domain. Thirteen of these mappings wer compared with a silver standard.
- Phase 3: implemented a prototype Ontologies Mapping Service for 10 mappings between 5 public ontologies in the Phenotype and Disease domains (below).
- Publication of our paper entitled “Matching disease and phenotype ontologies in the ontology alignment initiative” in J Biomedical Semantics 2016
- DOI: 10.1186/s13326-017-0162-9 PMID: 29197409 EUPMC: PMC5712086
***Contact Ian Harrow about joining the Community of Interest***
Resources
- Ontologies Guidelines for Best Practice
- Ontologies Mapping Tools RFI requirements and results
- Ontologies Mapping Service requirements and SLA
- Publicity folder on Google drive for presentation materials
- Community of Interest materials
- Ontologies Mapping Webinar recording, questions and panel answers from 23rd February 2017
- Publication of “Matching disease and phenotype ontologies in the ontology alignment initiative” in J Biomed Semantics
- The Ontology Alignment Evaluation Intiative (http://oaei.ontologymatching.org) includes the phenotype track organised by the Pistoia OM project
- Predicted Ontology Mappings
- 10 mappings between 5 public ontologies in the Phenotype and Disease domains from Feb 2018 of phase 3
- 10 mappings between 5 public ontologies in the Phenotype and Disease domains from Feb 2018 of phase 3
- OM/FAIR Webinar series recordings and slides